Trajectory 848

Order parameters quality = N/A

Computational methods Simulation metadata
System POPC/SM16/ERG(2:2:1)
Author(s) fernando.fr@zacatecasocc.tecnm.mx
Date 07/12/2025
DOI 10.5281/zenodo.17730115
Publication N/A
Force field Slipids
Simulation length (ps) 100020
Trajectory size 4287058824
Pre-equilibration time 6400000
Time left out 0
Temperature (K) 295
Number of particles 229192
Software gromacs
Ions N/A
Water SOL
Lipids - L1 ERG:POPC:SM16 (96:204:204)
Lipids - L2 ERG:POPC:SM16 (112:204:204)
Files View on GitHub main
 Link to simulation files
Hover over a component to view composition data.
Upper leaflet
Lower leaflet

Lipids


SM16
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
POPC
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main
ERG
  • Quality total: N/A
  • Quality headgroups: N/A
  • Quality tails: N/A
Download Mapping File main

Related experiments:

Article DOI Internal ID Type Temperature Actions

Order Parameters SM16

Download JSON main

Group fa

Group headgroup

Group sphingosine

Order Parameters POPC

Download JSON main

Group sn-1

Group sn-2

Group headgroup

Group glycerol backbone

Order Parameters ERG

Download JSON main

Group tail

Area per lipid

Form Factor

Experimental and Molecular Dynamics based descriptors

Quality of Order Parameters : N/A
OP Quality of headgroups: N/A
OP Quality of tails: N/A
FF Quality: N/A

Bilayer thickness : 4.9 nm
Area per lipid : 46.4 Å2